VIRsiRNAdb

../../tmp/servers/virsirnadb/10206680
Result for your query siRNA sequence

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Strain name	Start	Alignment	End	% Identity
Query	virsi1216	1	`ggtcacctttgacagactg`	19
X61596.1	Hepatitis C virus core, E1, NS1/E2, NS2, NS3, NS4a, NS4b and NS5 gene	7734	`...................`	7752	100
D13558.1	HPCJ483 Hepatitis C virus genome, complete sequence	7751	`...................`	7769	100
D90208.1	HPCJCG Hepatitis C virus ORF gene, complete cds	7739	`...................`	7757	100
D11168.1	HPCJTA Hepatitis C virus (HCV) complete genome	7751	`...................`	7769	100
D11355.1	HPCJTB Hepatitis C virus genomic RNA, complete genome, strain: JT'	7751	`...................`	7769	100
M96362.1	HPCUNKCDS Hepatitis C virus mRNA, complete cds	7752	`...................`	7770	100
M58335.1	HPCHUMR Hepatitis C virus subtype 1b, complete genome	7742	`...................`	7760	100
S62220.1	Hepatitis C virus subtype 1b, complete genome	7762	`...................`	7780	100
U16362.1	HCU16362 Hepatitis C virus subtype 1b, complete genome	7752	`...................`	7770	100
D63857.1	HPVHCVN Hepatitis C virus gene for E1 and E2/NS1 envelope glycoprotein	7658	`...................`	7676	100
D50482.1	HPCK1R3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R3), complete g	7739	`...................`	7757	100
D50483.1	HPCK1S1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S1), complete g	7739	`...................`	7757	100
D50484.1	HPCK1S3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S3), complete g	7739	`...................`	7757	100
D50485.1	HPCK1S2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S2), complete g	7739	`...................`	7757	100
D50481.1	HPCK1R2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R2), complete g	7739	`...................`	7757	100
D50480.1	HPCK1R1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R1), complete g	7739	`...................`	7757	100
D14484.1	HPCJRNA Hepatitis C virus strain J33 genomic RNA, complete genome	7751	`...................`	7769	100
D89872.1	Hepatitis C virus RNA for polyprotein, complete cds	7410	`...................`	7428	100
U89019.1	HCU89019 Hepatitis C virus subtype 1b, complete genome	7740	`...................`	7758	100
AJ238799.1	Hepatitis C virus type 1b complete genome, isolate Con1	7751	`...................`	7769	100
AF176573.1	Hepatitis C virus subtype 1b strain 274933RU, complete genome	7751	`...................`	7769	100
AJ238800.1	Hepatitis C virus type 1b complete genome, isolate NC1	7410	`...................`	7428	100
AB016785.1	Hepatitis C virus genomic RNA, complete sequence	7761	`...................`	7779	100
AF165047.1	Hepatitis C virus subtype 1b strain MD2-1, complete genome	7739	`...................`	7757	100
AF165048.1	Hepatitis C virus subtype 1b strain MD2-2, complete genome	7739	`...................`	7757	100
AF165051.1	Hepatitis C virus subtype 1b strain MD4-1, complete genome	7739	`...................`	7757	100
AF165052.1	Hepatitis C virus subtype 1b strain MD4-2, complete genome	7739	`...................`	7757	100
AF165053.1	Hepatitis C virus subtype 1b strain MD5-1, complete genome	7739	`...................`	7757	100
AF165054.1	Hepatitis C virus subtype 1b strain MD5-2, complete genome	7739	`...................`	7757	100
AF165057.1	Hepatitis C virus subtype 1b strain MD7-1, complete genome	7739	`...................`	7757	100
AF165058.1	Hepatitis C virus subtype 1b strain MD7-2, complete genome	7739	`...................`	7757	100
AF165059.1	Hepatitis C virus subtype 1b strain MD8-1, complete genome	7739	`...................`	7757	100
AF165060.1	Hepatitis C virus subtype 1b strain MD8-2, complete genome	7739	`...................`	7757	100
AF165061.1	Hepatitis C virus subtype 1b strain MD9-1, complete genome	7739	`...................`	7757	100
AF165062.1	Hepatitis C virus subtype 1b strain MD9-2, complete genome	7739	`...................`	7757	100
AF208024.1	Hepatitis C virus subtype 1b strain MD34, complete genome	7733	`...................`	7751	100
AF207752.1	Hepatitis C virus subtype 1b strain MD11, complete genome	7739	`...................`	7757	100
AF207753.1	Hepatitis C virus subtype 1b strain MD12, complete genome	7739	`...................`	7757	100
AF207754.1	Hepatitis C virus subtype 1b strain MD13, complete genome	7739	`...................`	7757	100
AF207757.1	Hepatitis C virus subtype 1b strain MD16, complete genome	7739	`...................`	7757	100
AF207758.1	Hepatitis C virus subtype 1b strain MD17, complete genome	7739	`...................`	7757	100
AF207759.1	Hepatitis C virus subtype 1b strain MD18, complete genome	7748	`...................`	7766	100
AF207760.1	Hepatitis C virus subtype 1b strain MD19, complete genome	7739	`...................`	7757	100
AF207762.1	Hepatitis C virus subtype 1b strain MD21, complete genome	7739	`...................`	7757	100
AF207763.1	Hepatitis C virus subtype 1b strain MD22, complete genome	7739	`...................`	7757	100
AF207764.1	Hepatitis C virus subtype 1b strain MD23, complete genome	7739	`...................`	7757	100
AF207765.1	Hepatitis C virus subtype 1b strain MD24, complete genome	7739	`...................`	7757	100
AF207766.1	Hepatitis C virus subtype 1b strain MD25, complete genome	7739	`...................`	7757	100
AF207766.1	Hepatitis C virus subtype 1b strain MD25, complete genome	9070	`___.........g..t...`	9085	73
AF207767.1	Hepatitis C virus subtype 1b strain MD26, complete genome	7739	`...................`	7757	100
AF207772.1	Hepatitis C virus subtype 1b strain MD31, complete genome	7739	`...................`	7757	100
AF207774.1	Hepatitis C virus subtype 1b strain MD33, complete genome	7739	`...................`	7757	100
AB049087.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT05	7720	`...................`	7738	100
AB049088.1	Hepatitis C virus genomic RNA, complete genome, isolate: HCVT094	7751	`...................`	7769	100
AB049090.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	7720	`...................`	7738	100
AB049093.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT15	7720	`...................`	7738	100
AB049095.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT16	7720	`...................`	7738	100
AB049096.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT19	7720	`...................`	7738	100
AB049098.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT20	7720	`...................`	7738	100
AF333324.1	Hepatitis C virus type 1b polyprotein mRNA, complete cds	7751	`...................`	7769	100
AY045702.1	Hepatitis C virus isolate HCR6, complete genome	7753	`...................`	7771	100
AF483269.1	Hepatitis C virus type 1b isolate HCV-TR1 from Turkey, complete genom	7716	`...................`	7734	100
AF139594.2	Hepatitis C virus subtype 1b strain HCV-N, complete genome	7766	`...................`	7784	100
AY587845.1	Hepatitis C virus strain RF1_2k/1b, N687 polyprotein gene, complete c	7690	`...................`	7708	100
AB154177.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154178.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154179.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154180.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154181.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154182.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154185.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154186.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154187.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154191.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154192.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154194.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154198.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154199.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154200.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154201.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154202.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154203.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154204.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154205.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB154206.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`...................`	7757	100
AB191333.1	Hepatitis C virus genomic RNA, complete genome, strain:0	7751	`...................`	7769	100
DQ071885.1	Hepatitis C virus subtype 1b polyprotein mRNA, complete cds	7751	`...................`	7769	100
EF032892.1	Hepatitis C virus subtype 1b isolate BR1427_P1_10.7.03 polyprotein ge	7727	`...................`	7745	100
EF032893.1	Hepatitis C virus subtype 1b isolate BR1427_P3_11.10.03 polyprotein g	7725	`...................`	7743	100
AB249644.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima	7751	`...................`	7769	100
EF407460.1	Hepatitis C virus isolate 8007 polyprotein gene, complete cds	7701	`...................`	7719	100
EF407461.1	Hepatitis C virus isolate 5004 polyprotein gene, complete cds	7731	`...................`	7749	100
EF407471.1	Hepatitis C virus isolate 5044 polyprotein gene, complete cds	7696	`...................`	7714	100
EF407479.1	Hepatitis C virus isolate 4036 polyprotein gene, complete cds	7702	`...................`	7720	100
EF407480.1	Hepatitis C virus isolate 3043 polyprotein gene, complete cds	7698	`...................`	7716	100
EF407482.1	Hepatitis C virus isolate 6053 polyprotein gene, complete cds	7636	`...................`	7654	100
EF407485.1	Hepatitis C virus isolate 7026 polyprotein gene, complete cds	7706	`...................`	7724	100
EF407493.1	Hepatitis C virus isolate 3031 polyprotein gene, complete cds	7703	`...................`	7721	100
EF407503.1	Hepatitis C virus isolate 5083 polyprotein gene, complete cds	7698	`...................`	7716	100
EU155218.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V145/2005, complet	7700	`...................`	7718	100
EU155222.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V150/2004, complet	7699	`...................`	7717	100
EU155225.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V155/2003, complet	7700	`...................`	7718	100
EU155228.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V158/2003, complet	7699	`...................`	7717	100
EU155229.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V159/2004, complet	7699	`...................`	7717	100
EU155231.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V163/2002, complet	7699	`...................`	7717	100
EU155234.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V447/2006, complet	7703	`...................`	7721	100
EU155235.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V449/2006, complet	7699	`...................`	7717	100
EU482859.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V272/2003, complet	7699	`...................`	7717	100
EU482874.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V287/2005, complet	7702	`...................`	7720	100
EU482879.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V372/2006, complet	7702	`...................`	7720	100
EU482880.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V373/2006, complet	7702	`...................`	7720	100
EU482881.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V383/2003, complet	7708	`...................`	7726	100
EU155253.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V363/2006, complet	7702	`...................`	7720	100
EU155254.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V365/2006, complet	7700	`...................`	7718	100
EU155255.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V366/2006, complet	7705	`...................`	7723	100
EU155257.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V369/2006, complet	7699	`...................`	7717	100
EU155258.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V371/2006, complet	7699	`...................`	7717	100
EU155260.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V375/2006, complet	7699	`...................`	7717	100
EU155279.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V441/2001, complet	7699	`...................`	7717	100
EU155281.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V512/2005, complet	7699	`...................`	7717	100
EU155300.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V341/2003, complet	7698	`...................`	7716	100
EU155301.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V344/2001, complet	7699	`...................`	7717	100
EU155303.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V346/2001, complet	7699	`...................`	7717	100
EU155308.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V354/2003, complet	7699	`...................`	7717	100
EU155315.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V416/2001, complet	7699	`...................`	7717	100
EU155316.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V419/2002, complet	7699	`...................`	7717	100
EU155317.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V420/2002, complet	7699	`...................`	7717	100
EU155325.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V122/1991, complet	7699	`...................`	7717	100
EU155326.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V124/1992, complet	7699	`...................`	7717	100
EU155328.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V127/1992, complet	7699	`...................`	7717	100
EU155329.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V128/1992, complet	7699	`...................`	7717	100
EU155330.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V130/1994, complet	7721	`...................`	7739	100
EU155331.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V131/1990, complet	7699	`...................`	7717	100
EU155333.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V133/1989, complet	7688	`...................`	7706	100
EU155334.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V134/1990, complet	7699	`...................`	7717	100
EU155356.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V273/2003, complet	7699	`...................`	7717	100
EU155358.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V276/2004, complet	7699	`...................`	7717	100
EU155359.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V277/2002, complet	7700	`...................`	7718	100
EU155360.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V278/2003, complet	7699	`...................`	7717	100
EU155362.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V282/2004, complet	7699	`...................`	7717	100
EU155363.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V285/2005, complet	7699	`...................`	7717	100
EU155365.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V289/2006, complet	7699	`...................`	7717	100
EU155367.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V295/2002, complet	7699	`...................`	7717	100
EU155369.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V297/2002, complet	7699	`...................`	7717	100
EU155375.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V309/2006, complet	7699	`...................`	7717	100
EU155381.2	Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V502/2004, complet	7699	`...................`	7717	100
AB426117.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima	7751	`...................`	7769	100
AB435162.2	Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima	7751	`...................`	7769	100
EU255960.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V312/2006, complet	7699	`...................`	7717	100
EU256059.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V220/2005, complet	7699	`...................`	7717	100
EU256064.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V376/2006, complet	7699	`...................`	7717	100
EU256065.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V377/2006, complet	7699	`...................`	7717	100
EU256066.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V382/2003, complet	7700	`...................`	7718	100
EU256088.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V149/2003, complet	7699	`...................`	7717	100
EU256090.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V162/2002, complet	7699	`...................`	7717	100
EU256098.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V343/2002, complet	7714	`...................`	7732	100
EU256099.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V348/2002, complet	7699	`...................`	7717	100
EU256100.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V349/2002, complet	7699	`...................`	7717	100
EU256102.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V415/2001, complet	7699	`...................`	7717	100
EU256103.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V418/2001, complet	7696	`...................`	7714	100
EU256000.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V143/2003, complet	7699	`...................`	7717	100
EU256045.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V380/2003, complet	7699	`...................`	7717	100
EU256075.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V279/2004, complet	7699	`...................`	7717	100
EU256076.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V280/2004, complet	7699	`...................`	7717	100
EU256078.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V284/2005, complet	7701	`...................`	7719	100
EU256085.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V305/2003, complet	7699	`...................`	7717	100
EU255961.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V137/1991, complet	7700	`...................`	7718	100
FJ024277.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1711/2007, comple	7699	`...................`	7717	100
FJ024279.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1715/2007, comple	7699	`...................`	7717	100
EU862835.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V509/2001, partial	7696	`...................`	7714	100
FJ390397.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1749/2008, comple	7699	`...................`	7717	100
FJ390398.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1750/2008, comple	7699	`...................`	7717	100
AB442219.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-	7751	`...................`	7769	100
AB442220.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH	7751	`...................`	7769	100
AB442221.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH	7751	`...................`	7769	100
AB442222.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-	7754	`...................`	7772	100
GU133617.1	Hepatitis C virus subtype 1b, complete genome	7751	`...................`	7769	100
AF207773.1	Hepatitis C virus subtype 1b strain MD32, complete genome	7740	`_..................`	7757	94
AB049091.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	7670	`_..................`	7687	94
AB049092.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	7721	`_..................`	7738	94
EF407483.1	Hepatitis C virus isolate 4043 polyprotein gene, complete cds	7727	`_..................`	7744	94
EU239714.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V417/2001, complet	7701	`_..................`	7718	94
EU155219.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V146/2002, complet	7700	`_..................`	7717	94
EU155220.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V147/2004, complet	7686	`_..................`	7703	94
EU155226.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V156/2004, complet	7700	`_..................`	7717	94
EU155232.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V164/2002, complet	7701	`_..................`	7718	94
EU482883.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V153/2005, complet	7705	`.................._`	7722	94
EU482885.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V448/2006, complet	7703	`_..................`	7720	94
EU482886.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V458/2006, complet	7704	`_..................`	7721	94
EU155324.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V121/1992, complet	7700	`_..................`	7717	94
EU155332.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V132/1996, complet	7700	`_..................`	7717	94
EU155364.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V288/2006, complet	7700	`_..................`	7717	94
EU155366.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V294/2002, complet	7700	`_..................`	7717	94
EU256061.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V364/2006, complet	7700	`_..................`	7717	94
EU255962.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V140/1991, complet	7417	`.................._`	7434	94
FJ024086.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1704/2007, comple	7697	`_..................`	7714	94
FJ390396.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1748/2007, comple	7700	`_..................`	7717	94
D10750.1	HPCJ491 Hepatitis C virus genome, complete sequence	7751	`................t..`	7769	94
M84754.1	HPCGENANTI Hepatitis C virus subtype 1b strain Taiwan, complete genome	7751	`.......a...........`	7769	94
U01214.1	HCU01214 Hepatitis C virus subtype 1b strain HCV-L2, complete genome	7752	`......t............`	7770	94
D10934.1	HPCRNA Hepatitis C virus RNA, complete genome sequence	7751	`................t..`	7769	94
D30613.1	HPCPP Hepatitis C virus complete genome sequence	7751	`......a............`	7769	94
D45172.1	HPCHCPO Hepatitis C virus genomic RNA for HCV polyprotein, complete cd	7751	`......a............`	7769	94
D85516.1	Hepatitis C virus genomic RNA, complete cds	7751	`...............g...`	7769	94
AJ000009.1	Hepatitis C virus complete genome sequence	7734	`......t............`	7752	94
D89815.1	Hepatitis C virus genomic RNA, complete sequence	7751	`................a..`	7769	94
AF054247.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L6S, complete	7751	`................t..`	7769	94
AF054248.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L2S, complete	7751	`................t..`	7769	94
AF054249.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L4S, complete	7752	`................t..`	7770	94
AF054250.1	Hepatitis C virus subtype 1b strain HC-J4, complete genome	7741	`................t..`	7759	94
AF165049.1	Hepatitis C virus subtype 1b strain MD3-1, complete genome	7739	`......t............`	7757	94
AF165050.1	Hepatitis C virus subtype 1b strain MD3-2, complete genome	7739	`......t............`	7757	94
AF165055.1	Hepatitis C virus subtype 1b strain MD6-1, complete genome	7748	`................a..`	7766	94
AF165056.1	Hepatitis C virus subtype 1b strain MD6-2, complete genome	7748	`................a..`	7766	94
AF165063.1	Hepatitis C virus subtype 1b strain MD10-1, complete genome	7739	`.................a.`	7757	94
AF165064.1	Hepatitis C virus subtype 1b strain MD10-2, complete genome	7739	`.................a.`	7757	94
AF207768.1	Hepatitis C virus subtype 1b strain MD27, complete genome	7739	`...t...............`	7757	94
AF207769.1	Hepatitis C virus subtype 1b strain MD28, complete genome	7739	`...............g...`	7757	94
AF207770.1	Hepatitis C virus subtype 1b strain MD29, complete genome	7739	`......t............`	7757	94
AF207771.1	Hepatitis C virus subtype 1b strain MD30, complete genome	7739	`......t............`	7757	94
AB049094.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT16	7755	`................t..`	7773	94
AB049099.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT21	7754	`......t............`	7772	94
AB049100.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT21	7720	`...............g...`	7738	94
AB049101.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT22	7720	`......a............`	7738	94
AF356827.1	Hepatitis C virus subtype 1b isolate HCV-S1, complete genome	7751	`...t...............`	7769	94
AB080299.1	Hepatitis C virus genomic RNA, complete genome, isolate:M1LE	7751	`...............g...`	7769	94
AY460204.1	Hepatitis C virus from Shanghai, complete genome	7754	`............t......`	7772	94
AY587844.1	Hepatitis C virus strain N589 polyprotein gene, complete cds	7699	`......t............`	7717	94
AB154183.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`......t............`	7757	94
AB154189.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`......t............`	7757	94
AB154190.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	7739	`......t............`	7757	94
EF638081.1	Hepatitis C virus subtype 1b from Hubei, complete genome	7707	`.................a.`	7725	94
EF407428.1	Hepatitis C virus isolate 1024 polyprotein gene, complete cds	7660	`......a............`	7678	94
EF407454.1	Hepatitis C virus isolate 6031 polyprotein gene, complete cds	7666	`......a............`	7684	94
EF407465.1	Hepatitis C virus isolate 6017 polyprotein gene, complete cds	7696	`......t............`	7714	94
EF407469.1	Hepatitis C virus isolate 4014 polyprotein gene, complete cds	7695	`......a............`	7713	94
EF407472.1	Hepatitis C virus isolate 4034 polyprotein gene, complete cds	7697	`......t............`	7715	94
EF407475.1	Hepatitis C virus isolate 3009 polyprotein gene, complete cds	7683	`......t............`	7701	94
EF407487.1	Hepatitis C virus isolate 6057 polyprotein gene, complete cds	7698	`......t............`	7716	94
EF407488.1	Hepatitis C virus isolate 8016 polyprotein gene, complete cds	7695	`......t............`	7713	94
EF407492.1	Hepatitis C virus isolate 7025 polyprotein gene, complete cds	7691	`...t...............`	7709	94
EF407497.1	Hepatitis C virus isolate 5002 polyprotein gene, complete cds	7695	`......t............`	7713	94
EF407501.1	Hepatitis C virus isolate 7055 polyprotein gene, complete cds	7724	`......t............`	7742	94
EF407502.1	Hepatitis C virus isolate 2038 polyprotein gene, complete cds	7780	`......t............`	7798	94
EF407504.1	Hepatitis C virus isolate 8069 polyprotein gene, complete cds	7705	`......t............`	7723	94
EU260395.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V10/2005, complete	7687	`......a............`	7705	94
EU362878.1	Hepatitis C virus isolate 1030_FU24 polyprotein (pol) gene, partial c	7714	`......a............`	7732	94
EU250017.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V508/2001, complet	7671	`......a............`	7689	94
EU234062.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V135/1992, complet	7699	`......t............`	7717	94
EU155217.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V142/2004, complet	7699	`......t............`	7717	94
EU155221.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V148/2004, complet	7699	`......t............`	7717	94
EU155223.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V151/2002, complet	7705	`......t............`	7723	94
EU155224.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V152/2003, complet	7699	`......t............`	7717	94
EU155227.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V157/2003, complet	7699	`...t...............`	7717	94
EU155230.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V160/2002, complet	7699	`...t...............`	7717	94
EU482838.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V361/2006, complet	7689	`......a............`	7707	94
EU482839.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V370/2006, complet	7699	`......t............`	7717	94
EU482860.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V302/2003, complet	7699	`......t............`	7717	94
EU482875.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V310/2005, complet	7699	`......t............`	7717	94
EU155252.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V362/2006, complet	7671	`......a............`	7689	94
EU155263.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V384/2005, complet	7699	`......t............`	7717	94
EU155264.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V385/2006, complet	7677	`......t............`	7695	94
EU155269.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V398/2006, complet	7673	`......a............`	7691	94
EU155280.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V442/2001, complet	7699	`......t............`	7717	94
EU155302.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V345/2001, complet	7699	`......t............`	7717	94
EU155305.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V350/2002, complet	7699	`......t............`	7717	94
EU155307.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V353/2002, complet	7700	`...t...............`	7718	94
EU155318.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V421/2005, complet	7699	`......t............`	7717	94
EU155327.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V125/1992, complet	7689	`......t............`	7707	94
EU155335.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V136/1992, complet	7699	`......t............`	7717	94
EU155337.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V141/1990, complet	7699	`................a..`	7717	94
EU155368.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V296/2001, complet	7699	`......t............`	7717	94
EU155374.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V308/2005, complet	7721	`......t............`	7739	94
EU155376.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V311/2006, complet	7699	`................t..`	7717	94
EU529679.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V76/2002, complete	7667	`......a............`	7685	94
EU529680.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V80/2002, complete	7691	`......t............`	7709	94
EU529682.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V291/2002, complet	7417	`......t............`	7435	94
EU660386.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V355/2006, complet	7699	`...t...............`	7717	94
EU660388.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V154/2001, complet	7700	`............t......`	7718	94
AB429050.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: AH1	7751	`.........c.........`	7769	94
EU255939.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V408/2006, complet	7673	`......a............`	7691	94
EU255950.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V241/2005, complet	7672	`......a............`	7690	94
EU255954.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V252/2002, complet	7679	`......a............`	7697	94
EU256062.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V368/2006, complet	7702	`...t...............`	7720	94
EU256091.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V455/2006, complet	7417	`......t............`	7435	94
EU256092.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V463/2006, complet	7699	`...a...............`	7717	94
EU256020.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V62/2003, complete	7687	`......a............`	7705	94
EU256026.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V82/2002, complete	7685	`......a............`	7703	94
EU256037.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V98/2004, complete	7687	`......a............`	7705	94
EU256074.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V264/2005, complet	7678	`......a............`	7696	94
EU256077.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V283/2005, complet	7699	`.................a.`	7717	94
EU256080.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V292/2002, complet	7699	`......t............`	7717	94
EU256081.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V293/2002, complet	7699	`.......a...........`	7717	94
EU256083.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V299/2005, complet	7699	`...t...............`	7717	94
EU256084.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V303/2003, complet	7705	`...g...............`	7723	94
EU255979.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V189/1991, complet	7681	`......a............`	7699	94
EU857431.1	Hepatitis C virus subtype 1b isolate Whu, complete genome	7751	`......a............`	7769	94
FJ024087.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1705/2007, comple	7681	`......a............`	7699	94
FJ024275.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1708/2007, comple	7646	`......g............`	7664	94
FJ478453.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V2148/1999, comple	7699	`......t............`	7717	94
FN435993.1	Hepatitis C virus subtype 1b complete genome, isolate EU1, genomic RN	7752	`......t............`	7770	94
FJ821465.1	Hepatitis C virus strain M21-2k/1b, complete genome	7737	`......t............`	7755	94
EU862834.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V37/2004, complete	7599	`......a............`	7617	94
GQ275355.1	Hepatitis C virus subtype 3a, complete genome	7791	`.........c.........`	7809	94
D10749.1	HPCHCJ1 Hepatitis C virus genomic RNA, complete genome, isolate: HC-J1	7755	`_.....a............`	7772	89
M67463.1	HPCCGAA Hepatitis C virus subtype 1a, complete genome	7755	`_.....a............`	7772	89
M62321.1	HPCPLYPRE Hepatitis C virus subtype 1a, complete genome	7755	`_.....a............`	7772	89
U45476.1	HCU45476 Hepatitis C virus isolate HD-1, complete genome	7752	`_................a.`	7769	89
AF011751.1	Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds	7755	`_.....a............`	7772	89
AF011752.1	Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds	7755	`_.....a............`	7772	89
AF011753.1	Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds	7755	`_.....a............`	7772	89
AF064490.1	Hepatitis C virus (isolate SA13) polyprotein gene, complete cds	7668	`...............g.._`	7685	89
AF271632.1	Hepatitis C virus subtype 1a clone pHCV-1/SF9 A, complete genome	7755	`_.....a............`	7772	89
AJ278830.1	Hepatitis C virus genomic RNA for polyprotein gene	7755	`_.....t............`	7772	89
AF290978.1	Hepatitis C virus subtype 1a isolate colonel, complete genome	7743	`_.....a............`	7760	89
AB049089.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT10	7720	`.........c........_`	7737	89
AB049097.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT19	7732	`...............g.._`	7749	89
AF511948.1	Hepatitis C virus isolate XF222 polyprotein-like gene, complete seque	7756	`_.....a............`	7773	89
AF511949.1	Hepatitis C virus isolate XF223 polyprotein-like gene, complete seque	7756	`_.....a............`	7773	89
AF511950.1	Hepatitis C virus isolate XF224 polyprotein-like gene, complete seque	7727	`_.....a............`	7744	89
EF032883.1	Hepatitis C virus subtype 1a isolate 03-32_P1_10.16.03 polyprotein ge	7677	`_.....a............`	7694	89
EF032884.1	Hepatitis C virus subtype 1a isolate 03-32_P2_5.14.04 polyprotein gen	7656	`_.....a............`	7673	89
EF032885.1	Hepatitis C virus subtype 1a isolate 03-32_P4_11.5.05 polyprotein gen	7676	`_.....a............`	7693	89
EF032886.1	Hepatitis C virus subtype 1a isolate BR601 polyprotein gene, complete	7682	`_.....a............`	7699	89
EF032887.1	Hepatitis C virus subtype 1a isolate BR554_P1_5.23.03 polyprotein gen	7689	`_.....a............`	7706	89
EF032888.1	Hepatitis C virus subtype 1a isolate BR554_P10_10.21.03 polyprotein g	7677	`_.....a............`	7694	89
EF032889.1	Hepatitis C virus subtype 1a isolate BR554_P16_6.24.04 polyprotein ge	7661	`_.....a............`	7678	89
EF032890.1	Hepatitis C virus subtype 1a isolate BR554_P17_10.21.04 polyprotein g	7675	`_.....a............`	7692	89
EF621489.1	Hepatitis C virus subtype 1a strain HC-TN, complete genome	7755	`_.....a............`	7772	89
EF407411.1	Hepatitis C virus isolate 5043 polyprotein gene, complete cds	7664	`_.....a............`	7681	89
EF407413.1	Hepatitis C virus isolate 5012 polyprotein gene, complete cds	7702	`_.....a............`	7719	89
EF407418.1	Hepatitis C virus isolate 7020 polyprotein gene, complete cds	7699	`_.....a............`	7716	89
EF407419.1	Hepatitis C virus isolate 5003 polyprotein gene, complete cds	7706	`_.....a............`	7723	89
EF407421.1	Hepatitis C virus isolate 8030 polyprotein gene, complete cds	7658	`_.....a............`	7675	89
EF407422.1	Hepatitis C virus isolate 6001 polyprotein gene, complete cds	7661	`_.....a............`	7678	89
EF407423.1	Hepatitis C virus isolate 8028 polyprotein gene, complete cds	7701	`_.....a............`	7718	89
EF407424.1	Hepatitis C virus isolate 5069 polyprotein gene, partial cds	7691	`_.....a............`	7708	89
EF407425.1	Hepatitis C virus isolate 6071 polyprotein gene, complete cds	7669	`_.....a............`	7686	89
EF407426.1	Hepatitis C virus isolate 8070 polyprotein genomic sequence	7704	`_.....a............`	7721	89
EF407427.1	Hepatitis C virus isolate 6025 polyprotein gene, complete cds	7702	`_.....a............`	7719	89
EF407432.1	Hepatitis C virus isolate 1013 polyprotein gene, complete cds	7716	`_.....a............`	7733	89
EF407433.1	Hepatitis C virus isolate 7046 polyprotein gene, complete cds	7706	`_.....a............`	7723	89
EF407434.1	Hepatitis C virus isolate 2011 polyprotein gene, complete cds	7677	`_.....a............`	7694	89
EF407435.1	Hepatitis C virus isolate 5014 polyprotein gene, complete cds	7672	`_.....a............`	7689	89
EF407437.1	Hepatitis C virus isolate 1030 polyprotein gene, complete cds	7715	`_.....a............`	7732	89
EF407438.1	Hepatitis C virus isolate 7012 polyprotein gene, complete cds	7702	`_.....a............`	7719	89
EF407439.1	Hepatitis C virus isolate 8003 polyprotein gene, complete cds	7700	`_.....a............`	7717	89
EF407440.1	Hepatitis C virus isolate 7002 polyprotein gene, complete cds	7703	`_.....a............`	7720	89
EF407442.1	Hepatitis C virus isolate 8012 polyprotein gene, complete cds	7669	`_.....a............`	7686	89
EF407443.1	Hepatitis C virus isolate 7024 polyprotein gene, complete cds	7715	`_.....a............`	7732	89
EF407444.1	Hepatitis C virus isolate 6030 polyprotein gene, complete cds	7676	`_.....a............`	7693	89
EF407445.1	Hepatitis C virus isolate 5009 polyprotein gene, complete cds	7676	`_.....a............`	7693	89
EF407446.1	Hepatitis C virus isolate 8009 polyprotein gene, complete cds	7676	`_.....a............`	7693	89
EF407447.1	Hepatitis C virus isolate 8004 polyprotein gene, complete cds	7715	`_.....a............`	7732	89
EF407449.1	Hepatitis C virus isolate 2027 polyprotein gene, complete cds	7715	`_.....a............`	7732	89
EF407450.1	Hepatitis C virus isolate 6020 polyprotein gene, complete cds	7673	`_.....a............`	7690	89
EF407451.1	Hepatitis C virus isolate 7041 polyprotein gene, complete cds	7678	`_.....a............`	7695	89
EF407452.1	Hepatitis C virus isolate 2005 polyprotein gene, complete cds	7686	`_.....a............`	7703	89
EF407453.1	Hepatitis C virus isolate 4035 polyprotein gene, complete cds	7702	`_.....a............`	7719	89
EF407455.1	Hepatitis C virus isolate 7065 polyprotein gene, complete cds	7715	`_.....a............`	7732	89
EF407456.1	Hepatitis C virus isolate 4025 polyprotein gene, complete cds	7714	`_.....a............`	7731	89
EF407457.1	Hepatitis C virus isolate 1003 polyprotein gene, complete cds	7559	`_.....a............`	7576	89
EF407470.1	Hepatitis C virus isolate 4064 polyprotein gene, complete cds	7704	`_.....t............`	7721	89
EF407476.1	Hepatitis C virus isolate 3012 polyprotein gene, complete cds	7687	`_..t...............`	7704	89
EU155241.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V71/2002, complete	7651	`_.....a............`	7668	89
EU155294.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V329/2002, complet	7649	`_.....a............`	7666	89
EU155345.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V221/2002, complet	7663	`_.....a............`	7680	89
EU155350.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V256/2003, complet	7636	`_.....a............`	7653	89
EU155379.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V29/2003, complete	7651	`_.....g............`	7668	89
EU362876.1	Hepatitis C virus isolate 1013_FU24 polyprotein (pol) gene, complete	7714	`_.....a............`	7731	89
EU362879.1	Hepatitis C virus isolate 2005_FU24 polyprotein (pol) gene, partial c	7714	`_.....a............`	7731	89
EU362880.1	Hepatitis C virus isolate 2011_FU24 polyprotein (pol) gene, partial c	7676	`_.....a............`	7693	89
EU362881.1	Hepatitis C virus isolate 2027_FU24 polyprotein (pol) gene, partial c	7716	`_.....a............`	7733	89
EU362883.1	Hepatitis C virus isolate 4025_FU24 polyprotein (pol) gene, partial c	7714	`_.....a............`	7731	89
EU362884.1	Hepatitis C virus isolate 4035_FU24 polyprotein (pol) gene, complete	7717	`_.....a............`	7734	89
EU362885.1	Hepatitis C virus isolate 5009_FU24 polyprotein (pol) gene, partial c	7673	`_.....a............`	7690	89
EU362886.1	Hepatitis C virus isolate 5014_FU24 polyprotein (pol) gene, complete	7677	`_.....a............`	7694	89
EU362887.1	Hepatitis C virus isolate 6020_FU24 polyprotein (pol) gene, complete	7673	`_.....a............`	7690	89
EU362890.1	Hepatitis C virus isolate 7002_FU24 polyprotein (pol) gene, partial c	7714	`_.....a............`	7731	89
EU362891.1	Hepatitis C virus isolate 7003_FU24 polyprotein (pol) gene, partial c	7677	`_.....a............`	7694	89
EU362892.1	Hepatitis C virus isolate 7012_FU24 polyprotein (pol) gene, complete	7700	`_.....a............`	7717	89
EU362894.1	Hepatitis C virus isolate 7041_FU24 polyprotein (pol) gene, partial c	7652	`_.....a............`	7669	89
EU362896.1	Hepatitis C virus isolate 7046_FU24 polyprotein (pol) gene, complete	7714	`_.....a............`	7731	89
EU362897.1	Hepatitis C virus isolate 7065_FU24 polyprotein (pol) gene, complete	7714	`_.....a............`	7731	89
EU362898.1	Hepatitis C virus isolate 8012_FU24 polyprotein (pol) gene, complete	7659	`_.....a............`	7676	89
EU362899.1	Hepatitis C virus isolate 1013q polyprotein (pol) gene, partial cds	7716	`_.....a............`	7733	89
EU362900.1	Hepatitis C virus isolate 1030q polyprotein (pol) gene, partial cds	7715	`_.....a............`	7732	89
EU362901.1	Hepatitis C virus isolate 2011q polyprotein (pol) gene, complete cds	7677	`_.....a............`	7694	89
EU362902.1	Hepatitis C virus isolate 2027q polyprotein (pol) gene, partial cds	7715	`_.....a............`	7732	89
EU362903.1	Hepatitis C virus isolate 4025q polyprotein (pol) gene, partial cds	7714	`_.....a............`	7731	89
EU362907.1	Hepatitis C virus isolate 7002q polyprotein (pol) gene, complete cds	7703	`_.....a............`	7720	89
EU239713.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V316/2001, complet	7703	`_.....a............`	7720	89
EU239715.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V423/2003, complet	7681	`_.....a............`	7698	89
EU239716.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V431/2002, complet	7672	`_.....a............`	7689	89
EU260396.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V11/2004, complete	7658	`_.....a............`	7675	89
EU234063.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V177/1992, complet	7676	`_.....a............`	7693	89
EU234064.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V182/1990, complet	7669	`_.....a............`	7686	89
EU155213.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V101/2004, complet	7684	`_.....a............`	7701	89
EU155214.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V104/2005, complet	7681	`_.....a............`	7698	89
EU155215.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V105/2004, complet	7650	`_.....a............`	7667	89
EU155216.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V115/2001, complet	7675	`_.....a............`	7692	89
EU155233.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V445/2006, complet	7682	`_.....a............`	7699	89
EU155236.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V450/2006, complet	7646	`_.....a............`	7663	89
EU155237.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V457/2006, complet	7696	`_.....a............`	7713	89
EU155238.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V465/2007, complet	7681	`_.....a............`	7698	89
EU155239.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V54/2004, complete	7673	`_.....a............`	7690	89
EU155242.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V73/2004, complete	7672	`_.....a............`	7689	89
EU155243.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V86/2005, complete	7650	`_.....a............`	7667	89
EU155244.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V90/2005, complete	7696	`_.....a............`	7713	89
EU155245.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V91/2003, complete	7673	`_.....a............`	7690	89
EU155246.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V93/2003, complete	7674	`_.....a............`	7691	89
EU482831.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V25/2003, complete	7661	`_.....a............`	7678	89
EU482832.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V33/2004, complete	7665	`_.....a............`	7682	89
EU482834.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V422/2002, complet	7637	`_.....a............`	7654	89
EU482835.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V427/2002, complet	7688	`_.....a............`	7705	89
EU482836.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V506/2002, complet	7683	`_.....a............`	7700	89
EU482842.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V389/2006, complet	7660	`_.....a............`	7677	89
EU482843.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V435/2005, complet	7682	`_.....a............`	7699	89
EU482844.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V436/2006, complet	7689	`_.....a............`	7706	89
EU482845.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V438/2006, complet	7688	`_.....a............`	7705	89
EU482846.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V439/2000, complet	7685	`_.....a............`	7702	89
EU482847.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V5/2004, complete	7672	`_.....a............`	7689	89
EU482848.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V9/2005, complete	7657	`_.....a............`	7674	89
EU482850.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V186/1990, complet	7650	`_.....a............`	7667	89
EU482852.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V217/1989, complet	7672	`_.....a............`	7689	89
EU482854.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V242/2001, complet	7672	`_.....a............`	7689	89
EU482855.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V249/2002, complet	7666	`_.....a............`	7683	89
EU482856.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V250/2002, complet	7673	`_.....a............`	7690	89
EU482858.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V271/2006, complet	7679	`_.....a............`	7696	89
EU482861.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V446/2006, complet	7681	`_.....a............`	7698	89
EU482862.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V454/2006, complet	7681	`_.....a............`	7698	89
EU482863.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V456/2006, complet	7685	`_.....a............`	7702	89
EU482864.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V459/2006, complet	7688	`_.....a............`	7705	89
EU482865.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V46/2003, complete	7661	`_.....a............`	7678	89
EU482866.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V460/2006, complet	7688	`_.....a............`	7705	89
EU482867.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V461/2006, complet	7688	`_.....a............`	7705	89
EU482869.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V70/2002, complete	7672	`_.....a............`	7689	89
EU482870.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V75/2004, complete	7696	`_.....a............`	7713	89
EU482871.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V77/2002, complete	7664	`_.....a............`	7681	89
EU482872.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V261/2004, complet	7687	`_.....a............`	7704	89
EU482873.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V28/2003, complete	7666	`_.....a............`	7683	89
EU482876.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V330/2002, complet	7690	`_.....a............`	7707	89
EU482884.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V38/2004, complete	7445	`_.....a............`	7462	89
EU482887.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V66/2002, complete	7651	`_.....a............`	7668	89
EU482889.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V179/1990, complet	7688	`_.....a............`	7705	89
EU155247.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1/2005, complete	7679	`_.....a............`	7696	89
EU155248.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V336/2006, complet	7673	`_.....a............`	7690	89
EU155249.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V337/2006, complet	7672	`_.....a............`	7689	89
EU155250.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V358/2006, complet	7680	`_.....a............`	7697	89
EU155251.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V359/2006, complet	7666	`_.....a............`	7683	89
EU155259.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V374/2006, complet	7700	`_................a.`	7717	89
EU155261.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V379/2005, complet	7701	`_.....t............`	7718	89
EU155265.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V388/2005, complet	7675	`_.....a............`	7692	89
EU155266.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V390/2006, complet	7624	`_.....a............`	7641	89
EU155267.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V391/2006, complet	7661	`_.....a............`	7678	89
EU155268.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V396/2006, complet	7650	`_.....a............`	7667	89
EU155270.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V399/2006, complet	7672	`_.....a............`	7689	89
EU155271.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V401/2006, complet	7677	`_.....a............`	7694	89
EU155272.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V404/2006, complet	7651	`_.....a............`	7668	89
EU155273.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V406/2006, complet	7624	`_.....a............`	7641	89
EU155275.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V409/2006, complet	7675	`_.....a............`	7692	89
EU155277.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V434/2003, complet	7650	`_.....a............`	7667	89
EU155278.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V437/2006, complet	7665	`_.....a............`	7682	89
EU155283.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V698/2006, complet	7688	`_.....a............`	7705	89
EU155284.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V317/2001, complet	7689	`_.....a............`	7706	89
EU155285.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V318/2001, complet	7663	`_.....a............`	7680	89
EU155286.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V319/2001, complet	7650	`_.....a............`	7667	89
EU155287.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V320/2001, complet	7710	`_.....a............`	7727	89
EU155288.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V322/2002, complet	7672	`_.....a............`	7689	89
EU155290.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V325/2001, complet	7660	`_.....a............`	7677	89
EU155291.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V326/2002, complet	7674	`_.....a............`	7691	89
EU155292.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V327/2001, complet	7682	`_.....a............`	7699	89
EU155293.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V328/2001, complet	7625	`_.....a............`	7642	89
EU155296.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V332/2002, complet	7671	`_.....a............`	7688	89
EU155297.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V333/2002, complet	7671	`_.....a............`	7688	89
EU155298.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V334/2002, complet	7685	`_.....g............`	7702	89
EU155304.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V347/2003, complet	7429	`_.....t............`	7446	89
EU155306.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V352/2002, complet	7700	`_..a...............`	7717	89
EU155309.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V356/2003, complet	7670	`_.....a............`	7687	89
EU155310.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V357/2004, complet	7670	`_.....a............`	7687	89
EU155311.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V411/2003, complet	7681	`_.....a............`	7698	89
EU155312.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V412/2000, complet	7663	`_.....a............`	7680	89
EU155313.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V413/2003, complet	7663	`_.....a............`	7680	89
EU155314.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V414/2004, complet	7629	`_.....a............`	7646	89
EU155319.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V424/2002, complet	7633	`_.....a............`	7650	89
EU155320.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V425/2001, complet	7626	`_.....a............`	7643	89
EU155321.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V426/2001, complet	7629	`_.....a............`	7646	89
EU155322.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V428/2001, complet	7669	`_.....a............`	7686	89
EU155323.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V429/2002, complet	7666	`_.....a............`	7683	89
EU155338.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V169/1996, complet	7673	`_.....a............`	7690	89
EU155339.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V172/1990, complet	7650	`_.....a............`	7667	89
EU155340.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V185/1991, complet	7650	`_.....a............`	7667	89
EU155342.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V197/1989, complet	7650	`_.....g............`	7667	89
EU155343.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V214/1996, complet	7674	`_.....a............`	7691	89
EU155346.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V236/2005, complet	7677	`_.....a............`	7694	89
EU155348.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V240/2005, complet	7664	`_.....a............`	7681	89
EU155352.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V262/2004, complet	7681	`_.....a............`	7698	89
EU155353.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V267/2005, complet	7673	`_.....a............`	7690	89
EU155354.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V269/2005, complet	7680	`_.....a............`	7697	89
EU155355.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V270/2006, complet	7679	`_.....a............`	7696	89
EU155373.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V307/2005, complet	7700	`_.....t............`	7717	89
EU155377.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V313/2006, complet	7700	`_.....t............`	7717	89
EU155378.2	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V26/2003, complete	7612	`_.....a............`	7629	89
EU155380.2	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V35/2004, complete	7660	`_.....a............`	7677	89
EU155382.2	Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V504/2003, complet	7706	`_.....t............`	7723	89
EU234065.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V212/1990, complet	7650	`_.....a............`	7667	89
EU529676.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V39/2004, complete	7687	`_.....a............`	7704	89
EU529677.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V52/2006, complete	7683	`_.....a............`	7700	89
EU529681.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V251/2005, complet	7671	`_.....a............`	7688	89
EU569722.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V215/1989, complet	7689	`_.....a............`	7706	89
EU569723.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V13/2005, complete	7674	`_.....a............`	7691	89
EU595697.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V507/2001, complet	7671	`_.....a............`	7688	89
EU595698.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V44/2001, complete	7672	`_.....a............`	7689	89
EU595699.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V78/2001, complete	7585	`_.....a............`	7602	89
EU660384.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V55/2005, complete	7703	`_.....a............`	7720	89
EU687194.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1563/2004, comple	7682	`_.....a............`	7699	89
EU687195.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1564/2007, comple	7689	`_.....a............`	7706	89
EU255927.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V222/2003, complet	7676	`_.....a............`	7693	89
EU255929.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V233/2004, complet	7681	`_.....a............`	7698	89
EU255931.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V108/2003, complet	7681	`_.....a............`	7698	89
EU255932.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V111/2005, complet	7681	`_.....a............`	7698	89
EU255935.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V462/2007, complet	7685	`_.....a............`	7702	89
EU255937.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V700/2006, complet	7672	`_.....a............`	7689	89
EU255938.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V88/2003, complete	7687	`_.....a............`	7704	89
EU255940.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V433/2006, complet	7688	`_.....a............`	7705	89
EU255941.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V697/2006, complet	7687	`_.....a............`	7704	89
EU255942.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V699/2007, complet	7687	`_.....a............`	7704	89
EU255943.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V223/2003, complet	7674	`_.....a............`	7691	89
EU255944.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V224/2003, complet	7657	`_.....a............`	7674	89
EU255945.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V225/2004, complet	7674	`_.....a............`	7691	89
EU255946.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V226/2005, complet	7682	`_.....a............`	7699	89
EU255947.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V228/2006, complet	7688	`_.....a............`	7705	89
EU255948.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V230/2003, complet	7683	`_.....a............`	7700	89
EU255949.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V235/2005, complet	7681	`_.....a............`	7698	89
EU255951.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V245/2005, complet	7687	`_.....a............`	7704	89
EU255953.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V248/2006, complet	7678	`_.....a............`	7695	89
EU255955.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V254/2002, complet	7664	`_.....a............`	7681	89
EU255957.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V260/2004, complet	7703	`_.....a............`	7720	89
EU255958.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V265/2005, complet	7681	`_.....a............`	7698	89
EU255959.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V268/2003, complet	7648	`_.....a............`	7665	89
EU256060.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V360/2006, complet	7675	`_.....a............`	7692	89
EU256067.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V402/2006, complet	7682	`_.....a............`	7699	89
EU256068.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V405/2006, complet	7675	`_.....a............`	7692	89
EU256087.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V114/2001, complet	7650	`_.....a............`	7667	89
EU256095.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V81/2002, complete	7685	`_.....a............`	7702	89
EU256096.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V321/2001, complet	7684	`_.....a............`	7701	89
EU256097.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V324/2001, complet	7681	`_.....a............`	7698	89
EU256101.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V351/2002, complet	7700	`_.....t............`	7717	89
EU256104.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V430/2005, complet	7684	`_.....a............`	7701	89
EU256105.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V505/2001, complet	7705	`_.....a............`	7722	89
EU256106.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V32/2004, complete	7673	`_.....a............`	7690	89
EU155347.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V239/2005, complet	7666	`_.....a............`	7683	89
EU255993.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V102/2004, complet	7684	`_.....a............`	7701	89
EU255994.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V103/2005, complet	7665	`_.....a............`	7682	89
EU255995.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V106/2004, complet	7680	`_.....a............`	7697	89
EU255997.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V109/2003, complet	7652	`_.....a............`	7669	89
EU255998.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V113/2001, complet	7682	`_.....a............`	7699	89
EU256003.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V444/2006, complet	7688	`_.....a............`	7705	89
EU256004.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V45/2005, complete	7662	`_.....a............`	7679	89
EU256005.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V451/2006, complet	7683	`_.....a............`	7700	89
EU256007.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V464/2006, complet	7671	`_.....a............`	7688	89
EU256008.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V47/2002, complete	7650	`_.....a............`	7667	89
EU256009.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V49/2004, complete	7668	`_.....a............`	7685	89
EU256011.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V51/2004, complete	7650	`_.....a............`	7667	89
EU256012.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V511/2006, complet	7689	`_.....a............`	7706	89
EU256013.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V53/2004, complete	7679	`_.....a............`	7696	89
EU256014.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V56/2004, complete	7650	`_.....a............`	7667	89
EU256015.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V57/2004, complete	7673	`_.....a............`	7690	89
EU256017.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V59/2005, complete	7677	`_.....a............`	7694	89
EU256018.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V60/2002, complete	7670	`_.....a............`	7687	89
EU256019.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V61/2001, complete	7677	`_.....a............`	7694	89
EU256021.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V64/2003, complete	7673	`_.....a............`	7690	89
EU256022.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V65/2003, complete	7672	`_.....a............`	7689	89
EU256023.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V67/2003, complete	7681	`_.....a............`	7698	89
EU256024.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V72/2006, complete	7650	`_.....a............`	7667	89
EU256025.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V79/2002, complete	7651	`_.....a............`	7668	89
EU256027.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V83/2003, complete	7694	`_.....a............`	7711	89
EU256028.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V84/2001, complete	7681	`_.....a............`	7698	89
EU256029.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V85/2001, complete	7668	`_.....t............`	7685	89
EU256030.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V87/2002, complete	7664	`_.....a............`	7681	89
EU256031.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V89/2006, complete	7679	`_.....a............`	7696	89
EU256032.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V92/2003, complete	7679	`_.....a............`	7696	89
EU256035.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V96/2004, complete	7681	`_.....a............`	7698	89
EU256036.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V97/2004, complete	7681	`_.....a............`	7698	89
EU256038.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V99/2004, complete	7686	`_.....a............`	7703	89
EU256041.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2/2005, complete	7686	`_.....a............`	7703	89
EU256043.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V3/2005, complete	7650	`_.....a............`	7667	89
EU256046.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V392/2006, complet	7681	`_.....a............`	7698	89
EU256047.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V393/2006, complet	7681	`_.....a............`	7698	89
EU256049.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V395/2006, complet	7681	`_.....a............`	7698	89
EU256050.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V397/2006, complet	7682	`_.....a............`	7699	89
EU256051.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V4/2005, complete	7677	`_.....a............`	7694	89
EU256053.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V440/2001, complet	7682	`_.....g............`	7699	89
EU256055.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V6/2001, complete	7677	`_.....a............`	7694	89
EU256056.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V7/2003, complete	7652	`_.....a............`	7669	89
EU256057.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V702/2006, complet	7689	`_.....a............`	7706	89
EU256058.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V8/2005, complete	7667	`_.....a............`	7684	89
EU256071.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V234/2004, complet	7650	`_.....a............`	7667	89
EU256072.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V238/2005, complet	7662	`_.....a............`	7679	89
EU256079.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V286/2005, complet	7701	`_..t...............`	7718	89
EU256082.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V298/2005, complet	7701	`_..t...............`	7718	89
EU255963.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V166/1992, complet	7682	`_.....a............`	7699	89
EU255964.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V167/1992, complet	7665	`_.....a............`	7682	89
EU255965.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V168/1990, complet	7679	`_.....a............`	7696	89
EU255966.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V170/1997, complet	7686	`_.....a............`	7703	89
EU255967.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V171/1997, complet	7660	`_.....a............`	7677	89
EU255968.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V173/1989, complet	7665	`_.....a............`	7682	89
EU255969.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V174/1992, complet	7677	`_.....a............`	7694	89
EU255970.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V176/1992, complet	7673	`_.....a............`	7690	89
EU255973.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V180/1990, complet	7676	`_.....a............`	7693	89
EU255974.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V181/1992, complet	7679	`_.....a............`	7696	89
EU255975.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V183/1994, complet	7680	`_.....a............`	7697	89
EU255976.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V184/1992, complet	7676	`_.....a............`	7693	89
EU255977.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V187/1991, complet	7680	`_.....a............`	7697	89
EU255978.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V188/1991, complet	7669	`_.....a............`	7686	89
EU255980.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V190/1990, complet	7673	`_.....a............`	7690	89
EU255981.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V191/1990, complet	7688	`_.....a............`	7705	89
EU255982.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V194/1990, complet	7679	`_.....a............`	7696	89
EU255983.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V195/1990, complet	7674	`_.....a............`	7691	89
EU255984.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V200/1990, complet	7667	`_.....a............`	7684	89
EU255985.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V201/1991, complet	7684	`_.....a............`	7701	89
EU255986.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V203/1989, complet	7682	`_.....a............`	7699	89
EU255987.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V205/1989, complet	7663	`_.....a............`	7680	89
EU255988.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V206/1995, complet	7671	`_.....a............`	7688	89
EU255989.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V208/1990, complet	7688	`_.....a............`	7705	89
EU255990.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V209/1992, complet	7680	`_.....a............`	7697	89
EU255991.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V210/1989, complet	7670	`_.....a............`	7687	89
EU255992.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V213/1992, complet	7676	`_.....a............`	7693	89
FJ024276.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1710/2007, comple	7647	`_.....a............`	7664	89
FJ024278.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1713/2007, comple	7649	`_.....a............`	7666	89
FJ024281.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1718/2007, comple	7679	`_.....a............`	7696	89
FJ024282.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1719/2005, comple	7667	`_.....a............`	7684	89
EU862823.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V24/2003, complete	7661	`_.....a............`	7678	89
EU862826.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V198/1989, partial	7672	`_.....a............`	7689	89
EU862827.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V218/1993, partial	7672	`_.....a............`	7689	89
FJ181999.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1706/2007, comple	7666	`_.....a............`	7683	89
FJ182001.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1716/2007, comple	7673	`_.....a............`	7690	89
FJ205867.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1709/2007, comple	7715	`_.....a............`	7732	89
FJ205868.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1714/2007, comple	7659	`_.....a............`	7676	89
FJ205869.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1720/2006, comple	7649	`_.....a............`	7666	89
FJ390394.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1745/2008, comple	7665	`_.....a............`	7682	89
FJ390395.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1747/2008, comple	7642	`_.....a............`	7659	89
FJ390399.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1751/2007, comple	7626	`_.....a............`	7643	89
FJ410172.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1746/2008, comple	7649	`_.....a............`	7666	89
EU781804.1	Hepatitis C virus subtype 1a isolate 02-46, complete genome	7679	`_.....a............`	7696	89
EU781823.1	Hepatitis C virus subtype 1a isolate 03-12, complete genome	7693	`_.....a............`	7710	89
GQ149768.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2147/2002, comple	7666	`_.....a............`	7683	89
AB520610.1	Hepatitis C virus subtype 1a genomic RNA, complete genome, strain: HC	7755	`_.....a............`	7772	89
EU862828.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V12/2004, complete	7688	`_.....a............`	7705	89
EU862831.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V400/2006, complet	7673	`_.....a............`	7690	89
EU862832.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V27/2003, complete	7669	`_.....a............`	7686	89
EU862836.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V244/2003, complet	7681	`_.....a............`	7698	89
EU862838.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V165/1992, complet	7689	`_.....a............`	7706	89
EU862839.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V175/1990, complet	7683	`_.....a............`	7700	89
EU862840.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V40/2003, complete	7696	`_.....a............`	7713	89
EU862841.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V48/2003, complete	7670	`_.....a............`	7687	89
AF009606.1	Hepatitis C virus subtype 1a polyprotein gene, complete cds	7755	`_.....a............`	7772	89
X76918.1	Hepatitis C virus genes for core, envelope and NS1 proteins	7741	`...t.....c.........`	7759	89
D49374.1	HPCFG Hepatitis C virus (isolate Tr Kj) genomic RNA, complete genome	7788	`...t.....c.........`	7806	89
Y12083.1	Hepatitis C virus genotype 6a RNA for HCV polyprotein	7717	`......a.........g..`	7735	89
AF046866.1	Hepatitis C virus subtype 3a strain CB polyprotein gene, complete cds	7782	`...t.....c.........`	7800	89
AJ132996.1	Hepatitis C virus, complete genome, isolate HCV-AD78	7756	`...t..t............`	7774	89
AF165045.1	Hepatitis C virus subtype 1b strain MD1-1, complete genome	7739	`...t..a............`	7757	89
AF165046.1	Hepatitis C virus subtype 1b strain MD1-2, complete genome	7739	`...t..a............`	7757	89
AF207755.1	Hepatitis C virus subtype 1b strain MD14, complete genome	7739	`...t..a............`	7757	89
AF207756.1	Hepatitis C virus subtype 1b strain MD15, complete genome	7739	`...g...........g...`	7757	89
AF207761.1	Hepatitis C virus subtype 1b strain MD20, complete genome	7739	`......t.........a..`	7757	89
AY859526.1	Hepatitis C virus (isolate 6a33), complete genome	7732	`......a.........t..`	7750	89
DQ480512.1	Hepatitis C virus subtype 6a strain 6a77, complete genome	7735	`......a.........g..`	7753	89
DQ480513.1	Hepatitis C virus subtype 6a strain 6a35, complete genome	7735	`......a.........g..`	7753	89
DQ480514.1	Hepatitis C virus subtype 6a strain 6a63, complete genome	7735	`......a.........g..`	7753	89
DQ480515.1	Hepatitis C virus subtype 6a strain 6a64, complete genome	7735	`......a.........g..`	7753	89
DQ480516.1	Hepatitis C virus subtype 6a strain 6a61, complete genome	7735	`......a.........g..`	7753	89
DQ480517.1	Hepatitis C virus subtype 6a strain 6a73, complete genome	7735	`......a.........g..`	7753	89
DQ480519.1	Hepatitis C virus subtype 6a strain 6a66, complete genome	7735	`......a.........t..`	7753	89
DQ480520.1	Hepatitis C virus subtype 6a strain 6a67, complete genome	7735	`......a.........g..`	7753	89
DQ480521.1	Hepatitis C virus subtype 6a strain 6a69, complete genome	7735	`......a.........g..`	7753	89
DQ480522.1	Hepatitis C virus subtype 6a strain 6a72, complete genome	7735	`......a.........g..`	7753	89
DQ480523.1	Hepatitis C virus subtype 6a strain 6a62, complete genome	7735	`......a.........g..`	7753	89
DQ480524.1	Hepatitis C virus subtype 6a strain 6a74, complete genome	7738	`......a.........g..`	7756	89
EF407414.1	Hepatitis C virus isolate 7018 polyprotein gene, complete cds	7657	`...t..a............`	7675	89
EF407448.1	Hepatitis C virus isolate 6018 polyprotein gene, partial cds	7714	`......a..c.........`	7732	89
EU246930.1	Hepatitis C virus strain D9 polyprotein gene, complete cds	7753	`......a.........g..`	7771	89
EU362877.1	Hepatitis C virus isolate 1024_FU24 polyprotein (pol) gene, complete	7659	`...t..a............`	7677	89
EU482849.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V138/1989, complet	7699	`......t.........t..`	7717	89
EU482857.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V263/2005, complet	7671	`...t..a............`	7689	89
EU482888.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V123/1992, complet	7702	`......t..........a.`	7720	89
EU155256.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V367/2006, complet	7699	`......t.........a..`	7717	89
EU155262.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V381/2001, complet	7699	`......t.........t..`	7717	89
EU155370.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V300/2005, complet	7699	`......t.........g..`	7717	89
EU155371.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V301/2005, complet	7696	`......t.........g..`	7714	89
EU155372.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V306/2004, complet	7699	`...............gt..`	7717	89
EU256089.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V161/2002, complet	7699	`......t.........t..`	7717	89
EU256094.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V74/2004, complete	7681	`...t..a............`	7699	89
EU256107.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V36/2004, complete	7681	`...t..a............`	7699	89
EU256001.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V144/2002, complet	7699	`......t..........a.`	7717	89
EU862824.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V31/2004, partial	7671	`...t..a............`	7689	89
FJ407092.1	Hepatitis C virus isolate IND-HCV-3i, complete genome	7783	`.........c.....g...`	7801	89
EU482853.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V227/2005, complet	7674	`_.....a..........._`	7690	84
EU155299.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V335/2003, complet	7674	`_.....a..........._`	7690	84
EU660385.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V258/2003, complet	7664	`_.....a..........._`	7680	84
EU256044.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V378/2001, complet	7660	`_.....a..........._`	7676	84
AM910652.2	Hepatitis C virus subtype 1g complete genome	7739	`_.....t..........._`	7755	84
D84262.2	Hepatitis C virus (isolate Th580) genomic RNA, complete genome GCCAGC	7780	`_.....a..........._`	7796	84
D63822.1	HPCJK046E2 Hepatitis C virus (isolate JK046) genomic RNA, complete gen	7785	`_..a.............a.`	7802	84
AY051292.1	Hepatitis C virus (isolate India) polyprotein mRNA, complete cds	7755	`_.....a.........g..`	7772	84
DQ835762.1	Hepatitis C virus subtype 6i isolate C-0159, complete genome	7766	`...g............g._`	7783	84
DQ835770.1	Hepatitis C virus subtype 6i isolate Th602, complete genome	7766	`...g............g._`	7783	84
EF032900.1	Hepatitis C virus subtype 1a isolate BR111_P5_4.30.03 polyprotein gen	7675	`_.....a..........g.`	7692	84
EF407415.1	Hepatitis C virus isolate 3018 polyprotein gene, complete cds	7705	`_.....t.........t..`	7722	84
EF407417.1	Hepatitis C virus isolate 4040 polyprotein gene, complete cds	7714	`_.....a.........a..`	7731	84
EF407431.1	Hepatitis C virus isolate 3005 polyprotein gene, complete cds	7650	`_.....a.........g..`	7667	84
EF407436.1	Hepatitis C virus isolate 7040 polyprotein gene, complete cds	7660	`_.....a.........g..`	7677	84
EF407441.1	Hepatitis C virus isolate 1036 polyprotein gene, complete cds	7714	`_.....a.........g..`	7731	84
EU246935.1	Hepatitis C virus strain TH24 polyprotein gene, complete cds	7707	`...g............g._`	7724	84
EU362882.1	Hepatitis C virus isolate 3005_FU24 polyprotein (pol) gene, complete	7674	`_.....a.........g..`	7691	84
EU362893.1	Hepatitis C virus isolate 7040_FU24 polyprotein (pol) gene, complete	7663	`_.....a.........g..`	7680	84
EU362895.1	Hepatitis C virus isolate 7043_FU24 polyprotein (pol) gene, complete	7673	`_..t..a............`	7690	84
EU234061.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V126/1991, complet	7700	`_..t..t............`	7717	84
EU482837.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V17/2004, complete	7672	`_.....a.........a..`	7689	84
EU482841.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V387/2004, complet	7688	`_..t..a............`	7705	84
EU482868.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V69/2002, complete	7672	`_.....a..........a.`	7689	84
EU155274.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V407/2006, complet	7626	`_..t..a............`	7643	84
EU155276.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V432/2002, complet	7674	`_.....a.........a..`	7691	84
EU155282.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V696/2006, complet	7672	`_.....a.........g..`	7689	84
EU155289.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V323/2001, complet	7681	`_..a..a............`	7698	84
EU155295.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V331/2002, complet	7674	`_.....a.........g..`	7691	84
EU155341.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V192/1992, complet	7683	`_.....a.........g..`	7700	84
EU155349.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V246/2005, complet	7662	`_.....a.........t..`	7679	84
EU155351.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V257/2003, complet	7676	`_..t..a............`	7693	84
EU529678.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V63/2005, complete	7669	`_.....a.........g..`	7686	84
EU660383.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V100/2004, complet	7681	`_.....a.........g..`	7698	84
EU660387.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V701/2003, complet	7672	`_..a..t............`	7689	84
EU687193.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1562/2005, comple	7650	`_..t..a............`	7667	84
EU255928.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V231/2003, complet	7681	`_..t..a............`	7698	84
EU255930.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V237/2005, complet	7681	`_..t..a............`	7698	84
EU255933.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V112/2003, complet	7663	`_..t..a............`	7680	84
EU255934.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V453/2006, complet	7689	`_.....a.........g..`	7706	84
EU255936.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V510/2006, complet	7682	`_..t..a............`	7699	84
EU255952.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V247/2005, complet	7676	`_..t..a............`	7693	84
EU255956.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V259/2003, complet	7682	`_.....a.........t..`	7699	84
EU256086.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V110/2003, complet	7653	`_.....a.........g..`	7670	84
EU255996.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V107/2003, complet	7686	`_.....t.........a..`	7703	84
EU255999.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V116/2002, complet	7668	`_.....a.........g..`	7685	84
EU256006.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V452/2006, complet	7689	`_.....a.........g..`	7706	84
EU256010.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V50/2002, complete	7650	`_..a..a............`	7667	84
EU256033.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V94/2005, complete	7682	`_.....a..........g.`	7699	84
EU256034.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V95/2006, complete	7685	`_.....a.........g..`	7702	84
EU256039.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V16/2004, complete	7674	`_.....a.........g..`	7691	84
EU256040.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V18/2004, complete	7681	`_.....a.........g..`	7698	84
EU256048.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V394/2006, complet	7681	`_..t..a............`	7698	84
EU256052.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V403/2006, complet	7680	`_..t..a............`	7697	84
EU256069.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V229/2006, complet	7662	`_.....a..........a.`	7679	84
FJ024274.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1707/2007, comple	7608	`_.....a.........g..`	7625	84
FJ182000.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1712/2007, comple	7649	`_.....a.........g..`	7666	84
EU781824.1	Hepatitis C virus subtype 1a isolate DN14, complete genome	7698	`_.....a..........g.`	7715	84
FJ025854.1	Hepatitis C virus strain P026 polyprotein gene, complete cds	7600	`.........c...c...._`	7617	84
FJ462441.1	Hepatitis C virus isolate QC97, complete genome	7744	`.........c...c...._`	7761	84
L02836.1	HPCCGENOM Hepatitis C virus subtype 1b strain HeBei, complete genome	7740	`....g.t.........a..`	7758	84
AB031663.1	Hepatitis C virus (isolate VAT96) genomic RNA, complete genome	7820	`...g...........gg..`	7838	84
AF238483.1	Hepatitis C virus subtype 2a strain MD2a-4, complete genome	7785	`...a...........ga..`	7803	84
AF238486.1	Hepatitis C virus subtype 2b strain MD2b-1, complete genome	7783	`...g...........gg..`	7801	84
AB030907.1	Hepatitis C virus (isolate JPUT971017) genomic RNA, complete genome	7820	`...g...........gg..`	7838	84
AY232734.1	Hepatitis C virus clone MD2b3-1 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232735.1	Hepatitis C virus clone MD2b3-2 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232736.1	Hepatitis C virus clone MD2b4-1 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232737.1	Hepatitis C virus clone MD2b4-2 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232738.1	Hepatitis C virus clone MD2b5-1 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232739.1	Hepatitis C virus clone MD2b5-2 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232740.1	Hepatitis C virus clone MD2b6-1 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232741.1	Hepatitis C virus clone MD2b6-2 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232742.1	Hepatitis C virus clone MD2b7-1 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232743.1	Hepatitis C virus clone MD2b7-2 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232748.1	Hepatitis C virus clone MD2b10-1 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
AY232749.1	Hepatitis C virus clone MD2b10-2 polyprotein mRNA, complete cds	7783	`...g...........gg..`	7801	84
DQ155561.1	Hepatitis C virus (isolate D54) polyprotein gene, partial cds	7789	`...g..t.........g..`	7807	84
DQ314806.1	Hepatitis C virus subtype 6g isolate HK6554, complete genome	7784	`...a..t..........a.`	7802	84
EF026073.1	Hepatitis C virus strain RF3 2/5 polyprotein mRNA, partial cds	7752	`.........c..t..g...`	7770	84
DQ988076.1	Hepatitis C virus isolate Eg7 polyprotein gene, partial cds	7660	`...g.........c.c...`	7678	84
AM408911.1	Hepatitis C virus partial gene for polyprotein, recombinant 2/5, geno	7752	`.........c..t..g...`	7770	84
AB559564.1	Hepatitis C virus HCV gene for hepatitis C virus polyprotein, complet	7820	`...g...........gg..`	7838	84
HM777359.1	Hepatitis C virus isolate C1292 genotype 2j, complete genome	7739	`...a..t.........g..`	7757	84
FN666428.2	Hepatitis C virus gene for polyprotein, genomic RNA, subtype 2q, isol	7792	`.........c.....gg..`	7810	84
FJ462438.1	Hepatitis C virus isolate QC383, complete genome	7755	`_............c.c.._`	7771	78
AY878651.1	Hepatitis C virus subtype 6k isolate KM41, complete genome	7734	`.............c.____`	7748	73
DQ278893.1	Hepatitis C virus subtype 6k isolate KM41, complete genome	7766	`.............c.____`	7780	73
EF424627.1	Hepatitis C virus subtype 6o isolate QC227, complete genome	7766	`...g...........____`	7780	73
FJ024280.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1717/2007, comple	7664	`_.....a.........___`	7678	73
AJ851228.1	Hepatitis C virus gene for polyprotein, genomic RNA, isolate Equatori	7728	`_..t..t..........a.`	7745	78
EF424629.1	Hepatitis C virus subtype 6c isolate Th846, complete genome	7764	`...g.........c.t.._`	7781	78
EF424629.1	Hepatitis C virus subtype 6c isolate Th846, complete genome	9095	`___.........g..c...`	9110	73

VIRsiRNAdb

Database of Viral siRNA / shRNA